PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_11732.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 442aa    MW: 49455.8 Da    PI: 6.7698
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_11732.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.27.2e-281342771128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....lelee...vi.kevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tks 80 
                   lp G++F+Ptd el+  +L+ k+++      +  ++   +i ke +i++++P++Lp  vk +    +fF+k  ++y  g+rk+r+          ++
  MLOC_11732.1 134 LPIGVKFDPTDLELL-GHLEGKISRAVphvlI--DDfipTIgKEEGICYTHPENLP-GVKLDGIASHFFHKIGNAYDVGTRKRRKisnnyhtvcDER 226
                   699************.88*****999855442..223333414558**********.566677899******************8577776655447 PP

           NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrap...kgektdWvmheyrl 128
                    +W++tgk++++l+++g  +g kk++v+y g+++   k++kt+W mh+y+l
  MLOC_11732.1 227 LRWHKTGKSRSILDNNGVIKGWKKIMVLYMGSKKgggKTKKTNWRMHQYHL 277
                   77***************************776651225579********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-34119296IPR003441NAC domain
PROSITE profilePS5100527.59134296IPR003441NAC domain
PfamPF023653.5E-12135277IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MASRVHAEPA PDPREARRQS RVGFACLLPW AKHFGHSLRL FKGRAHGRLG HPPGSFPPHP  60
PRMLVRSLLP HHSATPEPPQ RGRAPAMDEP FIVTGKIIAM MIRNGELVAE AGMECPKCEH  120
RIDNSDVSSQ WPGLPIGVKF DPTDLELLGH LEGKISRAVP HVLIDDFIPT IGKEEGICYT  180
HPENLPGVKL DGIASHFFHK IGNAYDVGTR KRRKISNNYH TVCDERLRWH KTGKSRSILD  240
NNGVIKGWKK IMVLYMGSKK GGGKTKKTNW RMHQYHLGVD EDEKDGELVV SKVFYQSESE  300
KAGQPLIWCG NEEYDSFAGE NDPPTPMTYP PEPCRPNDSP FETEQNQEED EEFRQSAVRG  360
AKEWLAGTTS HAVNDMALPG LDEHPSRGGT PDYPENSEKQ HLPLDAEELQ GFPDLGTSPH  420
FSSLAGMKFD SLDGFHSWLK DM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3577630.0AK357763.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1061G08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003581357.21e-123PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK22e-67NAC8_ARATH; NAC domain-containing protein 8
TrEMBLF2D1K60.0F2D1K6_HORVD; Predicted protein
STRINGMLOC_11732.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.15e-64NAC family protein